Publikationen des MPIO


Zeitschriftenartikel (40)

  1. 1.
    Bayerl, H.; Kraus, R. H. S.; Nowak, C.; Förster, D. W.; Fickel, J.; Kühn, R.: Fast and cost-effective single nucleotide polymorphism (SNP) detection in the absence of a reference genome using semi-deep next generation random amplicon sequencing (RAMseq). Molecular Ecology Resources 18 (1), S. 107 - 117 (2018)
  2. 2.
    Förster, D. W.; Bull, J. K.; Lenz, D.; Autenrieth, M.; Paijmans, J. L. A.; Kraus, R. H. S.; Nowak, C.; Bayerl, H.; Kühn, R.; Saveljev, A. P. et al.; Sindičić, M.; Hofreiter, M.; Schmidt, K.; Fickel, J.: Targeted re-sequencing of coding DNA sequences for SNP discovery in non-model species. bioRxiv (2018)
  3. 3.
    Jax, E.; Wink, M.; Kraus, R. H. S.: Avian transcriptomics: opportunities and challenges. Journal of Ornithology (2018)
  4. 4.
    Ottenburghs, J.; Megens, H.-J.; Kraus, R. H. S.; van Hooft, P.; van Wieren, S. E.; Crooijmans, R. P. M. A.; Ydenberg, R. C.; Groenen, M. A. M.; Prins, H. H. T.: A history of hybrids? Genomic patterns of introgression in the True Geese. BMC Evolutionary Biology 17, 201 (2017)
  5. 5.
    Ottenburghs, J.; Kraus, R. H. S.; van Hooft, P.; van Wieren, S. E.; Ydenberg, R. C.; Prins, H. H. T.: Avian introgression in the genomic era. BMC Avian Research 8, 30 (2017)
  6. 6.
    Söderquist, P.; Elmberg, J.; Gunnarsson, G.; Thulin, C.-G.; Champagnon, J.; Guillemain, M.; Kreisinger, J.; Prins, H. H. T.; Crooijmans, R. P. M. A.; Kraus, R. H. S.: Admixture between released and wild game birds: A changing genetic landscape in European mallards (Anas platyrhynchos). European Journal of Wildlife Research 63, 98 (2017)
  7. 7.
    Allen, S. J.; Bryant, K. A.; Kraus, R. H. S.; Loneragan, N. R.; Kopps, A. M.; Brown, A. M.; Gerber, L.; Krützen, M.: Genetic isolation between coastal and fishery-impacted, offshore bottlenose dolphin (Tursiops spp.) populations. Molecular Ecology 25 (12), S. 2735 - 2753 (2016)
  8. 8.
    Chapman, J. R.; Hellgren, O.; Helin, A. S.; Kraus, R. H. S.; Cromie, R. L.; Waldenström, J.: The evolution of innate immune genes: Purifying and balancing selection on β-defensins in waterfowl. Molecular Biology and Evolution 33 (12), S. 3075 - 3087 (2016)
  9. 9.
    Gager, Y.; Tarland, E.; Lieckfeldt, D.; Ménage, M.; Botero-Castro, F.; Rossiter, S. J.; Kraus, R. H. S.; Ludwig, A.; Dechmann, D. K. N.: The value of molecular vs. morphometric and acoustic information for species identification using sympatric molossid bats. PLoS One 11 (3), e0150780 (2016)
  10. 10.
    Kraus, R. H. S.; Figuerola, J.; Klug, K.: No genetic structure in a mixed flock of migratory and non-migratory Mallards. Journal of Ornithology 157 (3), S. 919 - 922 (2016)
  11. 11.
    Kraus, R. H. S.: Peer review: Matchmaker aims to cut journal shopping. Nature 531 (7595), S. 448 - 448 (2016)
  12. 12.
    Ottenburghs, J.; Megens, H. J.; Kraus, R. H. S.; Madsen, O.; van Hooft, P.; van Wieren, S. E.; Crooijmans, R. P.; Ydenberg, R. C.; Groenen, M. A.; Prins, H. H.: A tree of geese: A phylogenomic perspective on the evolutionary history of True Geese. Molecular Phylogenetics and Evolution 101, S. 303 - 313 (2016)
  13. 13.
    Smitz, N.; Hooft, P. V.; Heller, R.; Cornélis, D.; Chardonnet, P.; Kraus, R. H. S.; Greyling, B.; Crooijmans, R.; Groenen, M.; Michaux, J.: Genome-wide single nucleotide polymorphism (SNP) identification and characterization in a non-model organism, the African buffalo (Syncerus caffer), using next generation sequencing. Mammalian Biology 81 (6), S. 595 - 603 (2016)
  14. 14.
    Steyer, K.; Kraus, R. H. S.; Mölich, T.; Anders, O.; Cocchiararo, B.; Frosch, C.; Geib, A.; Götz, M.; Herrmann, M.; Hupe, K. et al.; Kohnen, A.; Krüger, M.; Müller, F.; Pir, J. B.; Reiners, T. E.; Roch, S.; Schade, U.; Schiefenhövel, P.; Siemund, M.; Simon, O.; Steeb, S.; Streif, S.; Streit, B.; Thein, J.; Tiesmeyer, A.; Trinzen, M.; Vogel, B.; Nowak, C.: Large-scale genetic census of an elusive carnivore, the European wildcat (Felis s. silvestris). Conservation Genetics 17 (5), S. 1183 - 1199 (2016)
  15. 15.
    Zhang, Q.; Han, X.; Ye, Y.; Kraus, R. H. S.; Fan, L.; Yang, L.; Tao, Y.: Expression of HIF-1 alpha and its target genes in the Nanorana parkeri heart: Implications for high altitude adaptation. Asian Herpetological Research 7 (1), S. 12 - 20 (2016)
  16. 16.
    Zhang, Q.; Han, X.; Kraus, R. H. S.; Yang, L.; Fan, L.; Ye, Y.; Tao, Y.: The expression plasticity of Hypoxia related genes in high altitude and plains Nanorana parkeri populations. Asian Herpetological Research 7 (1), S. 21 - 27 (2016)
  17. 17.
    De Boer, J. G.; Groenen, M. A.; Pannebakker, B. A.; Beukeboom, L. W.; Kraus, R. H. S.: Population-level consequences of complementary sex determination in a solitary parasitoid. BMC Evolutionary Biology 15, 98 (2015)
  18. 18.
    Kraus, R. H. S.; Wink, M.: Avian genomics: Fledging into the wild! Journal of Ornithology 156 (4), S. 851 - 865 (2015)
  19. 19.
    Kraus, R. H. S.; von Haldt, B.; Cocciararo, B.; Harms, V.; Bayerl, H.; Kühn, R.; Förster, D. W.; Fickel, J.; Roos, C.; Nowak, C.: A single-nucleotide polymorphism-based approach for rapid and cost-effective genetic wolf monitoring in Europe based on noninvasively collected samples. Molecular Ecology Notes 15 (2), S. 295 - 305 (2015)
  20. 20.
    Frosch, C.; Kraus, R. H. S.; Angst, C.; Allgöwer, R.; Michaux, J.; Teubner, J.; Nowak, C.: The genetic legacy of multiple beaver reintroductions in Central Europe. PLoS One 9 (5), e97619 (2014)
  21. 21.
    Greminger, M. P.; Stölting, K. N.; Nater, A.; Goossens, B.; Arora, N.; Bruggmann, R.; Patrignani, A.; Nussberger, B.; Sharma, R.; Kraus, R. H. S. et al.; Ambu, L. N.; Singleton, I.; Chikhi, L.; van Schaik, C. P.; Krützen, M.: Generation of SNP datasets for orangutan population genomics using improved reduced-representation sequencing and direct comparisons of SNP calling algorithms. BMC Genomics 15, 16 (2014)
  22. 22.
    Senn, H.; Ogden, R.; Frosch, C.; Syrůčková, A.; Campbell‐Palmer, R.; Munclinger, P.; Durka, W.; Kraus, R. H. S.; Saveljev, A. P.; Nowak, C. et al.; Stubbe, A.; Stubbe, M.; Michaux, J.; Lavrov, V.; Samiya, R.; Ulevicius, A.; Rosell, F.: Nuclear and mitochondrial genetic structure in the Eurasian beaver (Castor fiber) – implications for future reintroductions. Evolutionary Applications 7 (6), S. 645 - 662 (2014)
  23. 23.
    Hartmann, S. A.; Steyer, K.; Kraus, R. H. S.; Segelbacher, G.; Nowak, C.: Potential barriers to gene flow in the endangered European wildcat (Felis silvestris). Conservation Genetics Resources 14 (2), S. 413 - 426 (2013)
  24. 24.
    Huang, Y.; Li, Y.; Burt, D. W.; Chen, H.; Zhang, Y.; Qian, W.; Kim, H.; Gan, S.; Zhao, Y.; Li, J. et al.; Yi, K.; Feng, H.; Zhu, P.; Li, B.; Liu, Q.; Fairley, S.; Magor, K. E.; Du, Z.; Hu, X.; Goodman, L.; Tafer, H.; Vignal, A.; Lee, T.; Kim, K.-W.; Sheng, Z.; An, Y.; Searle, S.; Herrero, J.; Groenen, M. A.; Crooijmans, R. P.; Faraut, T.; Cai, Q.; Webster, R. G.; Aldridge, J. R.; Warren, W. C.; Bartschat, S.; Kehr, S.; Marz, M.; Stadler, P. F.; Smith, J.; Kraus, R. H. S.; Zhao, Y.; Ren, L.; Fei, J.; Morisson, M.; Kaiser, P.; Griffin, D. K.; Rao, M.; Pitel, F.; Wang, J.; Li, N.: The duck genome and transcriptome provide insight into an avian influenza virus reservoir species. Nature Genetics 45 (7), S. 776 - 783 (2013)
  25. 25.
    Jonker, R.; Kraus, R. H. S.; Zhang, Q.; Hooft, P.; Larsson, K.; van der Jeugd, H.; Kurvers, R.; van Wieren, S.; Loonen, M.; Crooijmans, R. et al.; Ydenberg, R.; Groenen, M.; Prins, H.: Genetic consequences of breaking migratory traditions in barnacle geese Branta leucopsis. Molecular Ecology 22, S. 5835 - 5847 (2013)
  26. 26.
    Kraus, R. H. S.; Hooft, P.; Megens, H.; Tsvey, A.; Fokin, S. Y.; Ydenberg, R. C.; Prins, H. H.: Global lack of flyway structure in a cosmopolitan bird revealed by a genome wide survey of single nucleotide polymorphisms. Molecular Ecology 22, S. 41 - 55 (2013)
  27. 27.
    Kurvers, R. H.; Adamczyk, V. M.; Kraus, R. H. S.; Hoffman, J. I.; van Wieren, S. E.; van der Jeugd, H. P.; Amos, W.; Prins, H. H.; Jonker, R. M.: Contrasting context-dependence of familiarity and kinship in animal social networks. Animal Behaviour 86 (5), S. 993 - 1001 (2013)
  28. 28.
    Steyer, K.; Simon, O.; Kraus, R. H. S.; Haase, P.; Nowak, C.: Hair trapping with valerian-treated lure sticks as a tool for genetic wildcat monitoring in low-density habitats. European Journal of Wildlife Research 59, S. 39 - 46 (2013)
  29. 29.
    Jonker, R. M.; Zhang, Q.; Hooft, P. V.; Loonen, M.; der Jeugd, H. P. V.; Crooijmans, R.; Groenen, M. A.; Prins, H. H.; Kraus, R. H. S.: The development of a genome wide SNP set for the Barnacle goose Branta leucopsis. PLoS One 7 (7), e38412 (2012)
  30. 30.
    Kraus, R. H. S.; Kerstens, H. H.; van Hooft, P.; Megens, H.-J.; Elmberg, J.; Tsvey, A.; Sartakov, D.; Soloviev, S. A.; Crooijmans, R. P.; Groenen, M. A. et al.; Ydenberg, R. C.; Prins, H. H.: Widespread horizontal genomic exchange does not erode species barriers among sympatric ducks. BMC Evolutionary Biology 12, 45 (2012)
  31. 31.
    Thielsch, A.; Völker, E.; Kraus, R. H. S.; Schwenk, K.: Discrimination of hybrid classes using cross‐species amplification of microsatellite loci: methodological challenges and solutions in Daphnia. Molecular Ecology Resources 12, S. 697 - 705 (2012)
  32. 32.
    Duijns, S.; van Dijk, J. G.; Kraus, R. H. S.; Mateman, A. C.; van den Brink, B.; van Hooft, P.: An additional field method to sex adult Barn Swallows during the non-breeding season in Zambia: white spot length in the outer tail feather. Ostrich 82 (2), S. 129 - 133 (2011)
  33. 33.
    Kraus, R. H. S.; Zeddeman, A. P.; van Hooft, P.; Sartakov, D.; Soloviev, S. A.; Ydenberg, R. C.; Prins, H. H.: Evolution and connectivity in the world-wide migration system of the mallard: Inferences from mitochondrial DNA. BMC Genetics 12, 99 (2011)
  34. 34.
    Kraus, R. H. S.; Kerstens, H. H.; Hooft, P. V.; Crooijmans, R. P.; Poel, J. J. V. D.; Elmberg, J.; Vignal, A.; Huang, Y.; Li, N.; Prins, H. H. et al.; Groenen, M. A.: Genome wide SNP discovery, analysis and evaluation in mallard (Anas platyrhynchos). BMC Genomics 12, 150 (2011)
  35. 35.
    Kraus, R. H. S.; van Hooft, P.; Waldenström, J.; Latorre-Margalef, N.; Ydenberg, R. C.; Prins, H. H.: Avian Influenza Surveillance with FTA Cards: Field Methods, Biosafety, and Transportation Issues Solved. Journal of visualized experiments 54, e2832 (2011)
  36. 36.
    Smitz, N.; van Hooft, P.; Heller, R.; Chardonnet, P.; Cornelis, D.; Kraus, R. H. S.; Crooijmans, R.; Groenen, M.; Michaux, J.: Inferring population structures of African buffalo (Syncerus caffer) by means of Single Nucleotide Polymorphism (SNP) markers. Mammalian Biology 76, S. 22 (2011)
  37. 37.
    Dlouhá, Š.; Thielsch, A.; Kraus, R. H. S.; Seda, J.; Schwenk, K.; Petrusek, A.: Identifying hybridizing taxa within the Daphnia longispina species complex: a comparison of genetic methods and phenotypic approaches. Hydrobiologia 643, S. 107 - 122 (2010)
  38. 38.
    Jonker, R.; Kurvers, R.; Goedbloed, D.; Kraus, R. H. S.: Beren, zalmen en vegetatie in Canada. De Nederlandse Jager 13, S. 48 - 49 (2010)
  39. 39.
    Kraus, R. H. S.; Goedbloed, D. J.; van Hooft, P.; Ydenberg, R. C.: De rol van wild bij ziekteverspreiding. Nieuwsbrief/Stichting de Eik, S. 4 - 5 (2010)
  40. 40.
    Kraus, R. H. S.; Hooft, P. V.; Waldenström, J.; Latorre-Margalef, N.: Avian influenza surveillance: on the usability of FTA® cards to solve biosafety and transport issues. Wildfowl Special Issue 2, S. 215 - 223 (2009)
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